2CLS

The crystal structure of the human RND1 GTPase in the active GTP bound state


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.207 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The Crystal Structure of the Human Rnd1 Gtpase in the Active GTP Bound State

Pike, A.C.W.Yang, X.Colebrook, S.Gileadi, O.Sobott, F.Bray, J.Wen Hwa, L.Marsden, B.Zhao, Y.Schoch, G.Elkins, J.Debreczeni, J.E.Turnbull, A.P.von Delft, F.Arrowsmith, C.Edwards, A.Weigelt, J.Sundstrom, M.Doyle, D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
RHO-RELATED GTP-BINDING PROTEIN RHO6 AB198Homo sapiensMutation(s): 0 
Gene Names: RND1RHO6
Find proteins for Q92730 (Homo sapiens)
Explore Q92730 
Go to UniProtKB:  Q92730
NIH Common Fund Data Resources
PHAROS:  Q92730
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GTP
Query on GTP

Download Ideal Coordinates CCD File 
A, B
GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
 Ligand Interaction
MG
Query on MG

Download Ideal Coordinates CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.31 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.207 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 67.168α = 90
b = 67.762β = 90
c = 206.409γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2006-05-04
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Refinement description, Version format compliance
  • Version 1.2: 2018-01-24
    Changes: Database references, Structure summary