8C0E

The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase, Wzz, from enterobacterial common antigen biosynthesis form a complex.

Weckener, M.Woodward, L.S.Clarke, B.R.Liu, H.Ward, P.N.Le Bas, A.Bhella, D.Whitfield, C.Naismith, J.H.

(2023) Open Biol 13: 220373-220373

  • DOI: https://doi.org/10.1098/rsob.220373
  • Primary Citation of Related Structures:  
    8C0E

  • PubMed Abstract: 

    The enterobacterial common antigen (ECA) is a carbohydrate polymer that is associated with the cell envelope in the Enterobacteriaceae . ECA contains a repeating trisaccharide which is polymerized by WzyE, a member of the Wzy membrane protein polymerase superfamily. WzyE activity is regulated by a membrane protein polysaccharide co-polymerase, WzzE. Förster resonance energy transfer experiments demonstrate that WzyE and WzzE from Pectobacterium atrosepticum form a complex in vivo , and immunoblotting and cryo-electron microscopy (cryo-EM) analysis confirm a defined stoichiometry of approximately eight WzzE to one WzyE. Low-resolution cryo-EM reconstructions of the complex, aided by an antibody recognizing the C-terminus of WzyE, reveals WzyE sits in the central membrane lumen formed by the octameric arrangement of the transmembrane helices of WzzE. The pairing of Wzy and Wzz is found in polymerization systems for other bacterial polymers, including lipopolysaccharide O-antigens and capsular polysaccharides. The data provide new structural insight into a conserved mechanism for regulating polysaccharide chain length in bacteria.


  • Organizational Affiliation

    Structural Biology, The Rosalind Franklin Institute, Harwell Campus, Didcot OX11 0QS, UK.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ECA polysaccharide chain length modulation protein
A, B, C, D, E
A, B, C, D, E, F, G, H
351Pectobacterium atrosepticumMutation(s): 0 
Gene Names: wzzE
Membrane Entity: Yes 
UniProt
Find proteins for Q6CZE3 (Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672))
Explore Q6CZE3 
Go to UniProtKB:  Q6CZE3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6CZE3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.1

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom20289/Z/16/Z
Wellcome TrustUnited Kingdom100209/Z/12/Z
Canadian Institutes of Health Research (CIHR)CanadaFDN-2016-148364
Medical Research Council (MRC, United Kingdom)United KingdomMC_UU_12014/7

Revision History  (Full details and data files)

  • Version 1.0: 2023-04-19
    Type: Initial release