Download MendeleyClostridium perfringens chitinase CP56_3454 apo form
Bloch, Y., Savvides, S.N.To be published.
8OVR
Clostridium perfringens chitinase CP56_3454 apo form
- PDB DOI: https://doi.org/10.2210/pdb8OVR/pdb
- Classification: HYDROLASE
- Organism(s): Clostridium perfringens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-04-26 Released: 2023-07-12
- Funding Organization(s): Research Foundation - Flanders (FWO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.172
- R-Value Work: 0.153
- R-Value Observed: 0.154
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Chitinase B | 630 | Clostridium perfringens | Mutation(s): 0 Gene Names: CP4_3454, pNetB_00069 |  | |
UniProt | |||||
Find proteins for F8UNI4 (Clostridium perfringens) Explore F8UNI4 Go to UniProtKB: F8UNI4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | F8UNI4 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PIN Query on PIN | B [auth A], C [auth A] | PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID) C8 H18 N2 O6 S2 IHPYMWDTONKSCO-UHFFFAOYSA-N |  | ||
| PG4 Query on PG4 | F [auth A] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N |  | ||
| NA Query on NA | D [auth A], E [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.172
- R-Value Work: 0.153
- R-Value Observed: 0.154
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 192.876 | α = 90 |
| b = 59.803 | β = 108.18 |
| c = 68.707 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-07-12 Deposition Author(s): Bloch, Y., Savvides, S.N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Research Foundation - Flanders (FWO) | Belgium | 12S0519N |
Revision History (Full details and data files)
- Version 1.0: 2023-07-12
Type: Initial release
