8OP2

Stacks of nucleocapsid rings of the N1-370 mutant of the human Respiratory Syncytial Virus


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural landscape of the respiratory syncytial virus nucleocapsids.

Gonnin, L.Desfosses, A.Bacia-Verloop, M.Chevret, D.Galloux, M.Eleouet, J.F.Gutsche, I.

(2023) Nat Commun 14: 5732-5732

  • DOI: https://doi.org/10.1038/s41467-023-41439-8
  • Primary Citation of Related Structures:  
    8OOU, 8OP1, 8OP2

  • PubMed Abstract: 

    Human Respiratory Syncytial Virus (HRSV) is a prevalent cause of severe respiratory infections in children and the elderly. The helical HRSV nucleocapsid is a template for the viral RNA synthesis and a scaffold for the virion assembly. This cryo-electron microscopy analysis reveals the non-canonical arrangement of the HRSV nucleocapsid helix, composed of 16 nucleoproteins per asymmetric unit, and the resulting systematic variations in the RNA accessibility. We demonstrate that this unique helical symmetry originates from longitudinal interactions by the C-terminal arm of the HRSV nucleoprotein. We explore the polymorphism of the nucleocapsid-like assemblies, report five structures of the full-length particles and two alternative arrangements formed by a C-terminally truncated nucleoprotein mutant, and demonstrate the functional importance of the identified longitudinal interfaces. We put all these findings in the context of the HRSV RNA synthesis machinery and delineate the structural basis for its further investigation.


  • Organizational Affiliation

    Institut de Biologie Structurale, Univ Grenoble Alpes, CEA, CNRS, IBS, 71 Avenue des martyrs, F-38044, Grenoble, France.


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Nucleoprotein370Human respiratory syncytial virus A strain LongMutation(s): 0 
UniProt
Find proteins for P03418 (Human respiratory syncytial virus A (strain A2))
Explore P03418 
Go to UniProtKB:  P03418
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP03418
Sequence Annotations
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  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains LengthOrganismImage
RNA (70-mer)B [auth U],
D [auth C]
70Trichoplusia ni
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Agence Nationale de la Recherche (ANR)FranceANR DecRisp ANR-19-CE11-0017-01

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-27
    Type: Initial release