8K80

Crystal structure of Langya Virus attachment (G) glycoprotein

• PDB DOI: https://doi.org/10.2210/pdb8K80/pdb

• Classification: VIRAL PROTEIN
• Organism(s): Langya virus
• Expression System: Homo sapiens
• Mutation(s): No 


• Deposited: 2023-07-28 Released: 2023-09-13 
• Deposition Author(s): Li, Y.H., Huang, X.Y., Xu, J.J.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.37 Å
• R-Value Free: 0.249 
• R-Value Work: 0.198 
• R-Value Observed: 0.201 

Literature

Crystal structure of Langya Virus attachment (G) glycoprotein

Li, Y.H., Huang, X.Y., Xu, J.J.

To be published.

Biological Assembly 1  

Global Symmetry: Helical - H  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 144.46 kDa 
• Atom Count: 10,116 
• Modelled Residue Count: 1,299 
• Deposited Residue Count: 1,302 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Langya Virus attachment glycoprotein	A, B, C	434	Langya virus	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.37 Å
• R-Value Free: 0.249 
• R-Value Work: 0.198 
• R-Value Observed: 0.201 
• Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 110.01	α = 90
b = 110.01	β = 90
c = 331.11	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data scaling
XDS	data reduction
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-09-13 
Deposition Author(s): Li, Y.H., Huang, X.Y., Xu, J.J.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32200762

Revision History  

• Version 1.0: 2023-09-13
  Type: Initial release