8IK0

Cryo-EM structure of Stimulator of interferon genes


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

The mechanism of STING autoinhibition and activation.

Liu, S.Yang, B.Hou, Y.Cui, K.Yang, X.Li, X.Chen, L.Liu, S.Zhang, Z.Jia, Y.Xie, Y.Xue, Y.Li, X.Yan, B.Wu, C.Deng, W.Qi, J.Lu, D.Gao, G.F.Wang, P.Shang, G.

(2023) Mol Cell 83: 1502-1518.e10

  • DOI: https://doi.org/10.1016/j.molcel.2023.03.029
  • Primary Citation of Related Structures:  
    8IK0, 8IK3

  • PubMed Abstract: 

    2',3'-cGAMP, produced by the DNA sensor cGAS, activates stimulator of interferon genes (STING) and triggers immune response during infection. Tremendous effort has been placed on unraveling the mechanism of STING activation. However, little is known about STING inhibition. Here, we found that apo-STING exhibits a bilayer with head-to-head as well as side-by-side packing, mediated by its ligand-binding domain (LBD). This type of assembly holds two endoplasmic reticulum (ER) membranes together not only to prevent STING ER exit but also to eliminate the recruitment of TBK1, representing the autoinhibited state of STING. Additionally, we obtained the filament structure of the STING/2',3'-cGAMP complex, which adopts a bent monolayer assembly mediated by LBD and transmembrane domain (TMD). The active, curved STING polymer could deform ER membrane to support its ER exit and anterograde transportation. Our data together provide a panoramic vision regarding STING autoinhibition and activation, which adds substantially to current understanding of the cGAS-STING pathway.


  • Organizational Affiliation

    Shanxi Provincial Key Laboratory of Protein Structure Determination, Shanxi Academy of Advanced Research and Innovation, Taiyuan 030012, China; CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China; Cryo-EM Center, Southern University of Science and Technology, Shenzhen 518055, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Stimulator of interferon genes protein,Immune protein Tsi3490Gallus gallusPseudomonas aeruginosa PAO1
This entity is chimeric
Mutation(s): 0 
Gene Names: STING1STINGTMEM173tsi3PA3485
Membrane Entity: Yes 
UniProt
Find proteins for Q9HYC4 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Explore Q9HYC4 
Go to UniProtKB:  Q9HYC4
Find proteins for E1C7U0 (Gallus gallus)
Explore E1C7U0 
Go to UniProtKB:  E1C7U0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsE1C7U0Q9HYC4
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.30 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2021YFC2301400

Revision History  (Full details and data files)

  • Version 1.0: 2023-05-17
    Type: Initial release
  • Version 1.1: 2024-05-01
    Changes: Data collection, Database references