8DBZ

CryoEM structure of Hantavirus ANDV Gn(H) protein complex with 2Fabs ANDV-5 and ANDV-34


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


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Literature

Antigenic mapping and functional characterization of human new world hantavirus neutralizing antibodies.

Engdahl, T.B.Binshtein, E.Brocato, R.L.Kuzmina, N.A.Principe, L.M.Kwilas, S.A.Kim, R.K.Chapman, N.S.Porter, M.S.Guardado-Calvo, P.Rey, F.A.Handal, L.S.Diaz, S.M.Zagol-Ikapitte, I.A.Tran, M.H.McDonald, W.H.Meiler, J.Reidy, J.X.Trivette, A.Bukreyev, A.Hooper, J.W.Crowe Jr., J.E.

(2023) Elife 12

  • DOI: https://doi.org/10.7554/eLife.81743
  • Primary Citation of Related Structures:  
    8DBZ

  • PubMed Abstract: 

    Hantaviruses are high-priority emerging pathogens carried by rodents and transmitted to humans by aerosolized excreta or, in rare cases, person-to-person contact. While infections in humans are relatively rare, mortality rates range from 1 to 40% depending on the hantavirus species. There are currently no FDA-approved vaccines or therapeutics for hantaviruses, and the only treatment for infection is supportive care for respiratory or kidney failure. Additionally, the human humoral immune response to hantavirus infection is incompletely understood, especially the location of major antigenic sites on the viral glycoproteins and conserved neutralizing epitopes. Here, we report antigenic mapping and functional characterization for four neutralizing hantavirus antibodies. The broadly neutralizing antibody SNV-53 targets an interface between Gn/Gc, neutralizes through fusion inhibition and cross-protects against the Old World hantavirus species Hantaan virus when administered pre- or post-exposure. Another broad antibody, SNV-24, also neutralizes through fusion inhibition but targets domain I of Gc and demonstrates weak neutralizing activity to authentic hantaviruses. ANDV-specific, neutralizing antibodies (ANDV-5 and ANDV-34) neutralize through attachment blocking and protect against hantavirus cardiopulmonary syndrome (HCPS) in animals but target two different antigenic faces on the head domain of Gn. Determining the antigenic sites for neutralizing antibodies will contribute to further therapeutic development for hantavirus-related diseases and inform the design of new broadly protective hantavirus vaccines.


  • Organizational Affiliation

    Department of Pathology, Microbiology and Immunology, Vanderbilt University, Nashville, United States.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Glycoprotein N353Orthohantavirus andesenseMutation(s): 0 
Gene Names: GPADT63_77597gpMADT63_77598gpM
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Find proteins for Q9E006 (Andes orthohantavirus)
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Go to UniProtKB:  Q9E006
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UniProt GroupQ9E006
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Fv (H) ANDV-34B [auth D]125Homo sapiensMutation(s): 0 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Fv (L) ANDV-34C [auth E]109Homo sapiensMutation(s): 0 
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Fv (H) ANDV-5D [auth B]127Homo sapiensMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Fv (L) ANDV-5E [auth C]112Homo sapiensMutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
COV44-79 heavy chain constant domain
F, H
103Homo sapiensMutation(s): 0 
UniProt
Find proteins for P0DOX5 (Homo sapiens)
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Fab Fc (L) KappaC
G, I
107Homo sapiensMutation(s): 0 
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Find proteins for P01834 (Homo sapiens)
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PHAROS:  P01834
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION4
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Defense Advanced Research Projects AgencyUnited StatesP3 HR0011-18-2-0001

Revision History  (Full details and data files)

  • Version 1.0: 2023-04-05
    Type: Initial release