7Y7N

Crystal structure of DUF371 domain-containing protein from Methanobrevibacter ruminantium

• PDB DOI: https://doi.org/10.2210/pdb7Y7N/pdb

• Classification: STRUCTURAL GENOMICS
• Organism(s): Methanobrevibacter ruminantium M1
• Expression System: Escherichia
• Mutation(s): No 


• Deposited: 2022-06-22 Released: 2023-07-12 
• Deposition Author(s): Yang, Q., Lai, Z.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.76 Å
• R-Value Free: 0.269 
• R-Value Work: 0.224 

Literature

Crystal structure of DUF371 domain-containing protein from methanobrevibacter ruminantium

Yang, Q., Lai, Z.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 15.42 kDa 
• Atom Count: 1,128 
• Modelled Residue Count: 137 
• Deposited Residue Count: 137 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A	137	Methanobrevibacter ruminantium M1	Mutation(s): 0  Gene Names: mru_1462
UniProt
Find proteins for D3E451 (Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / OCM 146 / M1)) Explore D3E451  Go to UniProtKB:  D3E451

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.76 Å
• R-Value Free: 0.269 
• R-Value Work: 0.224 
• Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 47.354	α = 90
b = 47.354	β = 90
c = 135.877	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-07-12 
Deposition Author(s): Yang, Q., Lai, Z.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2023-07-12
  Type: Initial release
  
• Version 1.1: 2023-11-29
  Changes: Data collection, Refinement description