7WG5

Cyclic electron transport supercomplex NDH-PSI from Arabidopsis

  • Classification: ELECTRON TRANSPORT
  • Organism(s): Arabidopsis thaliana
  • Mutation(s): No 
  • Membrane Protein: Yes  OPMmpstruc

  • Deposited: 2021-12-28 Released: 2022-03-16 
  • Deposition Author(s): Pan, X.W., Li, M.
  • Funding Organization(s): Ministry of Science and Technology (MoST, China), Chinese Academy of Sciences, National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.89 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana.

Su, X.Cao, D.Pan, X.Shi, L.Liu, Z.Dall'Osto, L.Bassi, R.Zhang, X.Li, M.

(2022) Mol Plant 15: 454-467

  • DOI: https://doi.org/10.1016/j.molp.2022.01.020
  • Primary Citation of Related Structures:  
    7WFD, 7WFE, 7WFF, 7WFG, 7WG5

  • PubMed Abstract: 

    Cyclic electron transport/flow (CET/CEF) in chloroplasts is a regulatory process essential for the optimization of plant photosynthetic efficiency. A crucial CEF pathway is catalyzed by a membrane-embedded NADH dehydrogenase-like (NDH) complex that contains at least 29 protein subunits and associates with photosystem I (PSI) to form the NDH-PSI supercomplex. Here, we report the 3.9 Å resolution structure of the Arabidopsis thaliana NDH-PSI (AtNDH-PSI) supercomplex. We constructed structural models for 26 AtNDH subunits, among which 11 are unique to chloroplasts and stabilize the core part of the NDH complex. In the supercomplex, one NDH can bind up to two PSI-light-harvesting complex I (PSI-LHCI) complexes at both sides of its membrane arm. Two minor LHCIs, Lhca5 and Lhca6, each present in one PSI-LHCI, interact with NDH and contribute to supercomplex formation and stabilization. Collectively, our study reveals the structural details of the AtNDH-PSI supercomplex assembly and provides a molecular basis for further investigation of the regulatory mechanism of CEF in plants.


  • Organizational Affiliation

    National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, P.R. China; University of Chinese Academy of Sciences, Beijing 100049, P.R. China.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I P700 chlorophyll a apoprotein A1A [auth AA],
Q [auth BA]
750Arabidopsis thalianaMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I P700 chlorophyll a apoprotein A2B [auth AB],
R [auth BB]
734Arabidopsis thalianaMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I iron-sulfur centerC [auth AC],
S [auth BC]
81Arabidopsis thalianaMutation(s): 0 
EC: 1.97.1.12
Membrane Entity: Yes 
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit II-2, chloroplasticD [auth AD],
T [auth BD]
204Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
UniProt
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit IV A, chloroplasticE [auth AE],
U [auth BE]
143Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit III, chloroplasticF [auth AF],
V [auth BF]
221Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit V, chloroplasticG [auth AG],
W [auth BG]
160Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit VI-2, chloroplasticH [auth AH],
X [auth BH]
145Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit VIIII [auth AI],
Y [auth BI]
37Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit IXJ [auth AJ],
Z [auth BJ]
44Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit psaK, chloroplasticAA [auth BK],
K [auth AK]
130Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I reaction center subunit XI, chloroplasticBA [auth BL],
L [auth AL]
219Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein 6, chloroplasticCA [auth B1],
M [auth A1]
241Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I chlorophyll a/b-binding protein 3-1, chloroplasticEA [auth B3],
N [auth A3]
273Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Chlorophyll a-b binding protein 4, chloroplasticO [auth A4]251Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I chlorophyll a/b-binding protein 6, chloroplasticP [auth A6]270Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I chlorophyll a/b-binding protein 2, chloroplasticDA [auth B2]257Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Find proteins for Q9SYW8 (Arabidopsis thaliana)
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Photosystem I chlorophyll a/b-binding protein 5, chloroplasticFA [auth B5]256Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 1, chloroplasticGA [auth A]360Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 2, chloroplasticHA [auth B]512Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 3, chloroplasticIA [auth C]120Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase chain 4, chloroplasticJA [auth D]506Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 4L, chloroplasticKA [auth E]101Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 5, chloroplasticLA [auth F]746Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit 6, chloroplasticMA [auth G]176Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of subcomplex B 1, chloroplasticNA [auth a]461Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of subcomplex B 2, chloroplasticOA [auth b]348Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of subcomplex B 3, chloroplasticPA [auth c]204Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
NDH dependent flow 6QA [auth d]161Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of subcomplex B 5, chloroplasticRA [auth e]212Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of lumenal location 1, chloroplasticSA [auth f]238Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of lumenal location 2, chloroplasticTA [auth g]190Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of lumenal location 3, chloroplasticUA [auth h]220Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
Photosynthetic NDH subunit of lumenal location 4, chloroplasticVA [auth i]217Arabidopsis thalianaMutation(s): 0 
EC: 5.2.1.8
Membrane Entity: Yes 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
Isoform 2 of Photosynthetic NDH subunit of lumenal location 5, chloroplasticWA [auth j]255Arabidopsis thalianaMutation(s): 0 
EC: 5.2.1.8
Membrane Entity: Yes 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit H, chloroplasticXA [auth H]393Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit I, chloroplasticYA [auth I]172Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit J, chloroplasticZA [auth J]158Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit K, chloroplasticAB [auth K]225Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit L, chloroplasticBB [auth L]191Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit M, chloroplasticCB [auth M]217Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
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Find proteins for Q2V2S7 (Arabidopsis thaliana)
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Go to UniProtKB:  Q2V2S7
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UniProt GroupQ2V2S7
Sequence Annotations
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  • Reference Sequence
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
NAD(P)H-quinone oxidoreductase subunit N, chloroplasticDB [auth N]209Arabidopsis thalianaMutation(s): 0 
EC: 7.1.1
Membrane Entity: Yes 
UniProt
Find proteins for Q9LVM2 (Arabidopsis thaliana)
Explore Q9LVM2 
Go to UniProtKB:  Q9LVM2
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UniProt GroupQ9LVM2
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
NdhOEB [auth O]158Arabidopsis thalianaMutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A178WB24 (Arabidopsis thaliana)
Explore A0A178WB24 
Go to UniProtKB:  A0A178WB24
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Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A178WB24
Sequence Annotations
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  • Reference Sequence
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
NdhTFB [auth T]122Arabidopsis thalianaMutation(s): 0 
Sequence Annotations
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  • Reference Sequence
Small Molecules
Ligands 13 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
DGD
Query on DGD

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EF [auth AB],
KN [auth BB]
DIGALACTOSYL DIACYL GLYCEROL (DGDG)
C51 H96 O15
LDQFLSUQYHBXSX-HXXRYREZSA-N
CHL
Query on CHL

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BQ [auth B3]
CI [auth A4]
DI [auth A4]
EI [auth A4]
EP [auth B2]
BQ [auth B3],
CI [auth A4],
DI [auth A4],
EI [auth A4],
EP [auth B2],
IP [auth B2],
JP [auth B2],
KP [auth B2],
MH [auth A3],
MI [auth A4],
NG [auth A1],
OO [auth B1],
RP [auth B2],
SG [auth A1],
SI [auth A6],
SQ [auth B5],
TO [auth B1],
TQ [auth B5],
UQ [auth B5],
WI [auth A6],
XI [auth A6],
YI [auth A6]
CHLOROPHYLL B
C55 H70 Mg N4 O6
MWVCRINOIIOUAU-UYSPMESUSA-M
CLA
Query on CLA

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AC [auth AA]
AE [auth AB]
AH [auth A1]
AI [auth A4]
AJ [auth A6]
AC [auth AA],
AE [auth AB],
AH [auth A1],
AI [auth A4],
AJ [auth A6],
AK [auth BA],
AL [auth BA],
AM [auth BB],
AN [auth BB],
AP [auth B1],
AQ [auth B3],
AR [auth B5],
BC [auth AA],
BE [auth AB],
BG [auth AK],
BI [auth A4],
BJ [auth A6],
BK [auth BA],
BM [auth BB],
BN [auth BB],
CC [auth AA],
CE [auth AB],
CG [auth AK],
CJ [auth A6],
CK [auth BA],
CM [auth BB],
CN [auth BB],
CO [auth BK],
CQ [auth B3],
DC [auth AA],
DE [auth AB],
DG [auth AK],
DJ [auth A6],
DK [auth BA],
DM [auth BB],
DN [auth BB],
DO [auth BK],
DQ [auth B3],
EC [auth AA],
EE [auth AB],
EJ [auth A6],
EK [auth BA],
EM [auth BB],
EO [auth BK],
EQ [auth B3],
FC [auth AA],
FE [auth AB],
FI [auth A4],
FK [auth BA],
FM [auth BB],
FP [auth B2],
FQ [auth B3],
GB [auth AA],
GC [auth AA],
GD [auth AB],
GE [auth AB],
GI [auth A4],
GK [auth BA],
GM [auth BB],
GP [auth B2],
GQ [auth B3],
HB [auth AA],
HC [auth AA],
HD [auth AB],
HE [auth AB],
HG [auth AL],
HH [auth A3],
HI [auth A4],
HK [auth BA],
HM [auth BB],
HO [auth BL],
HP [auth B2],
HQ [auth B3],
IB [auth AA],
IC [auth AA],
ID [auth AB],
IE [auth AB],
IG [auth AL],
IH [auth A3],
II [auth A4],
IK [auth BA],
IM [auth BB],
IO [auth BL],
IQ [auth B3],
JB [auth AA],
JC [auth AA],
JD [auth AB],
JE [auth AB],
JG [auth AL],
JH [auth A3],
JI [auth A4],
JJ [auth BA],
JK [auth BA],
JM [auth BB],
JO [auth BL],
JQ [auth B3],
KB [auth AA],
KC [auth AA],
KD [auth AB],
KE [auth AB],
KF [auth AF],
KH [auth A3],
KI [auth A4],
KJ [auth BA],
KK [auth BA],
KM [auth BB],
LB [auth AA],
LC [auth AA],
LD [auth AB],
LE [auth AB],
LF [auth AF],
LH [auth A3],
LI [auth A4],
LJ [auth BA],
LK [auth BA],
LM [auth BB],
LP [auth B2],
MB [auth AA],
MC [auth AA],
MD [auth AB],
ME [auth AB],
MF [auth AF],
MJ [auth BA],
MK [auth BA],
MM [auth BB],
MP [auth B2],
NB [auth AA],
NC [auth AA],
ND [auth AB],
NE [auth AB],
NH [auth A3],
NJ [auth BA],
NK [auth BA],
NL [auth BB],
NM [auth BB],
NP [auth B2],
OB [auth AA],
OC [auth AA],
OD [auth AB],
OE [auth AB],
OG [auth A1],
OH [auth A3],
OJ [auth BA],
OK [auth BA],
OL [auth BB],
OM [auth BB],
ON [auth BF],
OP [auth B2],
OQ [auth B5],
PB [auth AA],
PC [auth AA],
PD [auth AB],
PE [auth AB],
PF [auth AG],
PG [auth A1],
PH [auth A3],
PJ [auth BA],
PK [auth BA],
PM [auth BB],
PN [auth BF],
PO [auth B1],
PP [auth B2],
PQ [auth B5],
QB [auth AA],
QC [auth AA],
QD [auth AB],
QE [auth AB],
QG [auth A1],
QH [auth A3],
QJ [auth BA],
QK [auth BA],
QL [auth BB],
QM [auth BB],
QN [auth BF],
QO [auth B1],
QP [auth B2],
QQ [auth B5],
RB [auth AA],
RC [auth AA],
RD [auth AB],
RE [auth AB],
RF [auth AG],
RG [auth A1],
RH [auth A3],
RI [auth A6],
RJ [auth BA],
RK [auth BA],
RL [auth BB],
RM [auth BB],
RO [auth B1],
RQ [auth B5],
SB [auth AA],
SC [auth AA],
SD [auth AB],
SE [auth AB],
SF [auth AG],
SH [auth A3],
SJ [auth BA],
SK [auth BA],
SL [auth BB],
SM [auth BB],
SO [auth B1],
TB [auth AA],
TC [auth AA],
TD [auth AB],
TE [auth AB],
TG [auth A1],
TH [auth A3],
TI [auth A6],
TJ [auth BA],
TK [auth BA],
TL [auth BB],
TM [auth BB],
TN [auth BG],
UB [auth AA],
UC [auth AA],
UD [auth AB],
UE [auth AB],
UF [auth AH],
UG [auth A1],
UH [auth A3],
UI [auth A6],
UJ [auth BA],
UK [auth BA],
UL [auth BB],
UM [auth BB],
UN [auth BG],
UO [auth B1],
VB [auth AA],
VC [auth AA],
VD [auth AB],
VE [auth AB],
VG [auth A1],
VI [auth A6],
VJ [auth BA],
VK [auth BA],
VL [auth BB],
VM [auth BB],
VO [auth B1],
VQ [auth B5],
WB [auth AA],
WD [auth AB],
WG [auth A1],
WJ [auth BA],
WK [auth BA],
WL [auth BB],
WM [auth BB],
WN [auth BH],
WO [auth B1],
WP [auth B3],
WQ [auth B5],
XB [auth AA],
XD [auth AB],
XG [auth A1],
XJ [auth BA],
XK [auth BA],
XL [auth BB],
XM [auth BB],
XO [auth B1],
XP [auth B3],
XQ [auth B5],
YB [auth AA],
YD [auth AB],
YF [auth AJ],
YG [auth A1],
YJ [auth BA],
YK [auth BA],
YL [auth BB],
YM [auth BB],
YO [auth B1],
YP [auth B3],
YQ [auth B5],
ZB [auth AA],
ZD [auth AB],
ZG [auth A1],
ZH [auth A4],
ZI [auth A6],
ZJ [auth BA],
ZL [auth BB],
ZM [auth BB],
ZN [auth BJ],
ZO [auth B1],
ZP [auth B3],
ZQ [auth B5]
CHLOROPHYLL A
C55 H72 Mg N4 O5
ATNHDLDRLWWWCB-AENOIHSZSA-M
SQD
Query on SQD

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BO [auth BJ],
JR [auth e]
1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
C41 H78 O12 S
RVUUQPKXGDTQPG-JUDHQOGESA-N
LMG
Query on LMG

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ER [auth B5],
FH [auth A1],
QF [auth AG],
QI [auth A4]
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
C45 H86 O10
DCLTVZLYPPIIID-CVELTQQQSA-N
LHG
Query on LHG

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AG [auth AJ]
BL [auth BA]
CL [auth BA]
DP [auth B1]
EH [auth A1]
AG [auth AJ],
BL [auth BA],
CL [auth BA],
DP [auth B1],
EH [auth A1],
FR [auth B5],
GH [auth A3],
GR [auth F],
HR [auth a],
IJ [auth A6],
LG [auth A1],
MG [auth A1],
MO [auth B1],
NO [auth B1],
NQ [auth B3],
SN [auth BF],
VP [auth B2],
XC [auth AA],
YH [auth A3]
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
C38 H75 O10 P
BIABMEZBCHDPBV-MPQUPPDSSA-N
XAT
Query on XAT

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CH [auth A1]
CP [auth B1]
CR [auth B5]
GJ [auth A6]
LQ [auth B3]
CH [auth A1],
CP [auth B1],
CR [auth B5],
GJ [auth A6],
LQ [auth B3],
OI [auth A4],
TP [auth B2],
WH [auth A3]
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
C40 H56 O4
SZCBXWMUOPQSOX-WVJDLNGLSA-N
LUT
Query on LUT

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BH [auth A1]
BP [auth B1]
BR [auth B5]
FJ [auth A6]
KQ [auth B3]
BH [auth A1],
BP [auth B1],
BR [auth B5],
FJ [auth A6],
KQ [auth B3],
NI [auth A4],
OF [auth AF],
SP [auth B2],
VH [auth A3]
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
C40 H56 O2
KBPHJBAIARWVSC-NSIPBSJQSA-N
BCR
Query on BCR

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AD [auth AA]
AF [auth AB]
AO [auth BJ]
BD [auth AA]
BF [auth AB]
AD [auth AA],
AF [auth AB],
AO [auth BJ],
BD [auth AA],
BF [auth AB],
CD [auth AA],
CF [auth AB],
DH [auth A1],
DL [auth BA],
DR [auth B5],
EG [auth AK],
EL [auth BA],
FD [auth AA],
FL [auth BA],
FN [auth BB],
FO [auth BK],
GG [auth AL],
GL [auth BA],
GN [auth BB],
GO [auth BL],
HJ [auth A6],
HL [auth BA],
HN [auth BB],
IN [auth BB],
JF [auth AF],
JN [auth BB],
KG [auth AL],
KO [auth BL],
LL [auth BA],
LO [auth BL],
ML [auth BA],
MQ [auth B3],
NF [auth AF],
PI [auth A4],
PL [auth BB],
RN [auth BF],
TF [auth AG],
UP [auth B2],
VF [auth AI],
VN [auth BG],
WF [auth AI],
XE [auth AB],
XF [auth AJ],
XH [auth A3],
XN [auth BI],
YC [auth AA],
YE [auth AB],
YN [auth BJ],
ZC [auth AA],
ZE [auth AB],
ZF [auth AJ]
BETA-CAROTENE
C40 H56
OENHQHLEOONYIE-JLTXGRSLSA-N
LMU
Query on LMU

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DF [auth AB]
ED [auth AA]
FF [auth AB]
FG [auth AL]
GF [auth AB]
DF [auth AB],
ED [auth AA],
FF [auth AB],
FG [auth AL],
GF [auth AB],
JL [auth BA],
KL [auth BA],
LN [auth BB]
DODECYL-ALPHA-D-MALTOSIDE
C24 H46 O11
NLEBIOOXCVAHBD-YHBSTRCHSA-N
PQN
Query on PQN

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EN [auth BB],
WC [auth AA],
WE [auth AB],
ZK [auth BA]
PHYLLOQUINONE
C31 H46 O2
MBWXNTAXLNYFJB-NKFFZRIASA-N
SF4
Query on SF4

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DD [auth AA]
HF [auth AC]
IF [auth AC]
IL [auth BA]
KR [auth I]
DD [auth AA],
HF [auth AC],
IF [auth AC],
IL [auth BA],
KR [auth I],
LR [auth I],
MN [auth BC],
MR [auth K],
NN [auth BC]
IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-UHFFFAOYSA-N
FES
Query on FES

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IR [auth c]FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.89 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2017YFA0503702
Chinese Academy of SciencesChinaXDB08020106
National Natural Science Foundation of China (NSFC)China31930064
National Natural Science Foundation of China (NSFC)China31970264
National Natural Science Foundation of China (NSFC)China31770778

Revision History  (Full details and data files)

  • Version 1.0: 2022-03-16
    Type: Initial release