7T7T

Structure of TSK/BRU1 bound to histone H3.1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.17 Å
  • R-Value Free: 0.318 
  • R-Value Work: 0.279 
  • R-Value Observed: 0.282 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The histone H3.1 variant regulates TONSOKU-mediated DNA repair during replication.

Davarinejad, H.Huang, Y.C.Mermaz, B.LeBlanc, C.Poulet, A.Thomson, G.Joly, V.Munoz, M.Arvanitis-Vigneault, A.Valsakumar, D.Villarino, G.Ross, A.Rotstein, B.H.Alarcon, E.I.Brunzelle, J.S.Voigt, P.Dong, J.Couture, J.F.Jacob, Y.

(2022) Science 375: 1281-1286

  • DOI: https://doi.org/10.1126/science.abm5320
  • Primary Citation of Related Structures:  
    7T7T

  • PubMed Abstract: 

    The tail of replication-dependent histone H3.1 varies from that of replication-independent H3.3 at the amino acid located at position 31 in plants and animals, but no function has been assigned to this residue to demonstrate a unique and conserved role for H3.1 during replication. We found that TONSOKU (TSK/TONSL), which rescues broken replication forks, specifically interacts with H3.1 via recognition of alanine 31 by its tetratricopeptide repeat domain. Our results indicate that genomic instability in the absence of ATXR5/ATXR6-catalyzed histone H3 lysine 27 monomethylation in plants depends on H3.1, TSK, and DNA polymerase theta (Pol θ). This work reveals an H3.1-specific function during replication and a common strategy used in multicellular eukaryotes for regulating post-replicative chromatin maturation and TSK, which relies on histone monomethyltransferases and reading of the H3.1 variant.


  • Organizational Affiliation

    Ottawa Institute of Systems Biology, Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Ontario K1H 8M5, Canada.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein TONSOKU
A, B
531Citrus unshiuMutation(s): 0 
Gene Names: CUMW_187040
UniProt
Find proteins for A0A2H5Q1B8 (Citrus unshiu)
Explore A0A2H5Q1B8 
Go to UniProtKB:  A0A2H5Q1B8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2H5Q1B8
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Histone H3.1C [auth X],
D [auth W]
45Arabidopsis thalianaMutation(s): 0 
UniProt
Find proteins for P59226 (Arabidopsis thaliana)
Explore P59226 
Go to UniProtKB:  P59226
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP59226
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.17 Å
  • R-Value Free: 0.318 
  • R-Value Work: 0.279 
  • R-Value Observed: 0.282 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 82.89α = 90
b = 92.33β = 90
c = 209.91γ = 90
Software Package:
Software NamePurpose
SHELXDEphasing
HKL-2000data scaling
HKL-2000data reduction
PHENIXrefinement
Cootmodel building

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Natural Sciences and Engineering Research Council (NSERC, Canada)Canada--

Revision History  (Full details and data files)

  • Version 1.0: 2022-03-30
    Type: Initial release