Download MendeleyCrystal structure of R20A human Galectin-7 mutant
Pham, N.T.H., Calmettes, C., Doucet, N.To be published.
7N6C
Crystal structure of R22A human Galectin-7 mutant
- PDB DOI: https://doi.org/10.2210/pdb7N6C/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2021-06-08 Released: 2023-01-25
- Funding Organization(s): Natural Sciences and Engineering Research Council (NSERC, Canada), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Other government
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.235
- R-Value Work: 0.197
- R-Value Observed: 0.201
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Galectin-7 | 135 | Homo sapiens | Mutation(s): 1 Gene Names: LGALS7, PIG1, LGALS7B |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P47929 (Homo sapiens) Explore P47929 Go to UniProtKB: P47929 | |||||
PHAROS: P47929 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P47929 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| TRS Query on TRS | D [auth A] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |  | ||
| PEG Query on PEG | F [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A], J [auth B], K [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| EDO Query on EDO | E [auth A], G [auth A], H [auth A], I [auth A], L [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.235
- R-Value Work: 0.197
- R-Value Observed: 0.201
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 53.35 | α = 90 |
| b = 64.89 | β = 90 |
| c = 71.9 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XSCALE | data scaling |
| PHASER | phasing |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-01-25 Deposition Author(s): Pham, N.T.H., Calmettes, C., Doucet, N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | RGPIN 2016-05557 |
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01GM105978 |
| Other government | Canada | Fonds de Recherche du Quebec - Sante (FRQ-S) - Research Scholar Senior Career Award (281993) |
| Other government | Canada | Fonds de Recherche du Quebec - Sante (FRQ-S) - Junior 1 (251848) |
| Natural Sciences and Engineering Research Council (NSERC, Canada) | Canada | RGPIN-2017-06091 |
| Other government | Canada | Fonds de Recherche du Quebec - Sante (FRQ-S) - Doctoral Training scholarship (287239) |
Revision History (Full details and data files)
- Version 1.0: 2023-01-25
Type: Initial release - Version 1.1: 2023-10-25
Changes: Data collection, Refinement description
