Download MendeleyHuman Parechovirus 1 2A protein
von Castelmur, E., Perrakis, A.To be published.
7ZTW
Crystal Structure of Human Parechovirus 1 2A protein
- PDB DOI: https://doi.org/10.2210/pdb7ZTW/pdb
- Classification: VIRAL PROTEIN
- Organism(s): parechovirus A1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2022-05-11 Released: 2023-05-24
- Funding Organization(s): Netherlands Organisation for Scientific Research (NWO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.238
- R-Value Work: 0.184
- R-Value Observed: 0.187
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein 2A | 150 | parechovirus A1 | Mutation(s): 1 |  | |
UniProt | |||||
Find proteins for Q66578 (Human parechovirus 1 (strain Harris)) Explore Q66578 Go to UniProtKB: Q66578 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q66578 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ACT Query on ACT | G [auth D] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
| NA Query on NA | E [auth A], F [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.93 Å
- R-Value Free: 0.238
- R-Value Work: 0.184
- R-Value Observed: 0.187
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.548 | α = 90 |
| b = 127.805 | β = 95.19 |
| c = 54.282 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-05-24 Deposition Author(s): von Castelmur, E., Perrakis, A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Netherlands Organisation for Scientific Research (NWO) | Netherlands | -- |
Revision History (Full details and data files)
- Version 1.0: 2023-05-24
Type: Initial release
