Crystal structure of a GH43_12 retrieved from capybara gut metagenome
Cabral, L., Domingues, M.N., Martins, M.P., Persinoti, G.F., Morais, M.A.B., Murakami, M.T.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Glycoside Hydrolase Family 43_12 | 567 | metagenome | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | G [auth A] H [auth A] I [auth A] J [auth B] K [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E A, B, C, D, E, F | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 107.223 | α = 99.03 |
b = 107.383 | β = 113.38 |
c = 132.533 | γ = 108.45 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
SHELXDE | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Sao Paulo Research Foundation (FAPESP) | Brazil | 2015/26982-0 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 306135/2016-7 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 408600/2018-7 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 439195/2016-02018-7 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 142332/2017-8 |