6ZYX

Outer Dynein Arm-Shulin complex - Shulin region from Tetrahymena thermophila


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Shulin packages axonemal outer dynein arms for ciliary targeting.

Mali, G.R.Ali, F.A.Lau, C.K.Begum, F.Boulanger, J.Howe, J.D.Chen, Z.A.Rappsilber, J.Skehel, M.Carter, A.P.

(2021) Science 371: 910-916

  • DOI: https://doi.org/10.1126/science.abe0526
  • Primary Citation of Related Structures:  
    6ZYW, 6ZYX, 6ZYY

  • PubMed Abstract: 

    The main force generators in eukaryotic cilia and flagella are axonemal outer dynein arms (ODAs). During ciliogenesis, these ~1.8-megadalton complexes are assembled in the cytoplasm and targeted to cilia by an unknown mechanism. Here, we used the ciliate Tetrahymena to identify two factors (Q22YU3 and Q22MS1) that bind ODAs in the cytoplasm and are required for ODA delivery to cilia. Q22YU3, which we named Shulin, locked the ODA motor domains into a closed conformation and inhibited motor activity. Cryo-electron microscopy revealed how Shulin stabilized this compact form of ODAs by binding to the dynein tails. Our findings provide a molecular explanation for how newly assembled dyneins are packaged for delivery to the cilia.


  • Organizational Affiliation

    MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein heavy chain, outer arm proteinA [auth C]4,620Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q22A67 (Tetrahymena thermophila (strain SB210))
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UniProt GroupQ22A67
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chainB [auth J]93Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q24DI9 (Tetrahymena thermophila (strain SB210))
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chainC [auth K]111Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q22R86 (Tetrahymena thermophila (strain SB210))
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chainD [auth L]111Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for W7XJB1 (Tetrahymena thermophila (strain SB210))
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chainE [auth M]87Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q24CE5 (Tetrahymena thermophila (strain SB210))
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chain 2AF [auth N]132Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q1HGH8 (Tetrahymena thermophila)
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein light chain tctex-type 1 proteinG [auth O]117Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for A4VEB3 (Tetrahymena thermophila (strain SB210))
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
ShulinH [auth Y]1,200Tetrahymena thermophila CU428Mutation(s): 0 
Gene Names: TTHERM_00122270
UniProt
Find proteins for Q22YU3 (Tetrahymena thermophila (strain SB210))
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
Dynein intermediate chain 2I [auth d]667Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for I7M008 (Tetrahymena thermophila (strain SB210))
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellar outer dynein arm intermediate protein, putativeJ [auth e]670Tetrahymena thermophila CU428Mutation(s): 0 
UniProt
Find proteins for Q23FU1 (Tetrahymena thermophila (strain SB210))
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Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
GTP
Query on GTP

Download Ideal Coordinates CCD File 
K [auth Y]GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.30 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom--
Medical Research Council (MRC, United Kingdom)United Kingdom--

Revision History  (Full details and data files)

  • Version 1.0: 2021-01-20
    Type: Initial release
  • Version 1.1: 2021-02-17
    Changes: Database references
  • Version 1.2: 2021-03-10
    Changes: Database references
  • Version 1.3: 2021-03-17
    Changes: Database references