6XX1

The unique CBM3-Clocl_1192 of Hungateiclostridium clariflavum

• PDB DOI: https://doi.org/10.2210/pdb6XX1/pdb

• Classification: CELL ADHESION
• Organism(s): Acetivibrio clariflavus DSM 19732
• Expression System: Escherichia coli BL21
• Mutation(s): No 


• Deposited: 2020-01-26 Released: 2020-05-06 
• Deposition Author(s): Milana, M.V., Almog, R., Yaniv, O., Oded, L., Inna, R.G., Felix, F., Edward, A.B., Raphael, L.
• Funding Organization(s): Israel Science Foundation

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.61 Å
• R-Value Free: 0.211 
• R-Value Work: 0.183 
• R-Value Observed: 0.184 

Literature

The unique CBM3-Cthe_0271 from Ruminoclostridium thermocellum and CBM3-Clocl_1192 from Hungateiclostridium clariflavum

Milana, M.V., Almog, R., Yaniv, O., Oded, L., Inna, R.G., Felix, F., Edward, A.B., Raphael, L.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors.

Biological Assembly 4  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 4 assigned by authors.

Macromolecule Content

• Total Structure Weight: 67.64 kDa 
• Atom Count: 5,054 
• Modelled Residue Count: 590 
• Deposited Residue Count: 596 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cellulose binding domain-containing protein	A, B	148	Acetivibrio clariflavus DSM 19732	Mutation(s): 0  Gene Names: Clocl_1192
UniProt
Find proteins for G8LYV1 (Acetivibrio clariflavus (strain DSM 19732 / NBRC 101661 / EBR45)) Explore G8LYV1  Go to UniProtKB:  G8LYV1

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Cellulose binding domain-containing protein	C, D	150	Acetivibrio clariflavus DSM 19732	Mutation(s): 0  Gene Names: Clocl_1192
UniProt
Find proteins for G8LYV1 (Acetivibrio clariflavus (strain DSM 19732 / NBRC 101661 / EBR45)) Explore G8LYV1  Go to UniProtKB:  G8LYV1

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.61 Å
• R-Value Free: 0.211 
• R-Value Work: 0.183 
• R-Value Observed: 0.184 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 46.09	α = 90
b = 157.74	β = 94.41
c = 46.56	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-2000	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2020-05-06 
Deposition Author(s): Milana, M.V., Almog, R., Yaniv, O., Oded, L., Inna, R.G., Felix, F., Edward, A.B., Raphael, L.

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Funding Organization	Location	Grant Number
Israel Science Foundation	Israel	24/11

Revision History  

• Version 1.0: 2020-05-06
  Type: Initial release
  
• Version 1.1: 2024-01-24
  Changes: Data collection, Database references, Refinement description