6XOB

CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

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This is version 1.1 of the entry. See complete history


Literature

Human Antibodies Protect against Aerosolized Eastern Equine Encephalitis Virus Infection.

Williamson, L.E.Gilliland Jr., T.Yadav, P.K.Binshtein, E.Bombardi, R.Kose, N.Nargi, R.S.Sutton, R.E.Durie, C.L.Armstrong, E.Carnahan, R.H.Walker, L.M.Kim, A.S.Fox, J.M.Diamond, M.S.Ohi, M.D.Klimstra, W.B.Crowe Jr., J.E.

(2020) Cell 183: 1884-1900.e23

  • DOI: https://doi.org/10.1016/j.cell.2020.11.011
  • Primary Citation of Related Structures:  
    6XO4, 6XOB

  • PubMed Abstract: 

    Eastern equine encephalitis virus (EEEV) is one of the most virulent viruses endemic to North America. No licensed vaccines or antiviral therapeutics are available to combat this infection, which has recently shown an increase in human cases. Here, we characterize human monoclonal antibodies (mAbs) isolated from a survivor of natural EEEV infection with potent (<20 pM) inhibitory activity of EEEV. Cryo-electron microscopy reconstructions of two highly neutralizing mAbs, EEEV-33 and EEEV-143, were solved in complex with chimeric Sindbis/EEEV virions to 7.2 Å and 8.3 Å, respectively. The mAbs recognize two distinct antigenic sites that are critical for inhibiting viral entry into cells. EEEV-33 and EEEV-143 protect against disease following stringent lethal aerosol challenge of mice with highly pathogenic EEEV. These studies provide insight into the molecular basis for the neutralizing human antibody response against EEEV and can facilitate development of vaccines and candidate antibody therapeutics.


  • Organizational Affiliation

    Department of Pathology, Microbiology and Immunology, Vanderbilt University, Nashville, TN 37232, USA.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Togavirin
A, D, G, J
441Eastern equine encephalitis virusMutation(s): 0 
EC: 3.4.21.90
UniProt
Find proteins for Q88678 (Eastern equine encephalitis virus)
Explore Q88678 
Go to UniProtKB:  Q88678
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UniProt GroupQ88678
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Togavirin
B, E, H, K
420Eastern equine encephalitis virusMutation(s): 0 
EC: 3.4.21.90
UniProt
Find proteins for Q4QXJ7 (Eastern equine encephalitis virus (strain Florida 91-469))
Explore Q4QXJ7 
Go to UniProtKB:  Q4QXJ7
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UniProt GroupQ4QXJ7
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Togavirin
C, F, I, L
261Eastern equine encephalitis virusMutation(s): 0 
EC: 3.4.21.90
UniProt
Find proteins for Q4QXJ7 (Eastern equine encephalitis virus (strain Florida 91-469))
Explore Q4QXJ7 
Go to UniProtKB:  Q4QXJ7
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UniProt GroupQ4QXJ7
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  • Reference Sequence
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
EEEV-143 Fab heavy chain
M, O, Q, S
214Homo sapiensMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
EEEV-143 Fab light chain
N, P, R, T
213Homo sapiensMutation(s): 0 
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.50 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONFREALIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesU19 AI142790
Defense Threat Reduction Agency (DTRA)United StatesHDTRA1-13-1-0034

Revision History  (Full details and data files)

  • Version 1.0: 2020-12-23
    Type: Initial release
  • Version 1.1: 2021-01-13
    Changes: Database references