Polymorphisms in the VapBC toxin:antitoxin system mediate high frequency plasmid loss in Shigella sonnei
Martyn, J.E., Pilla, G., Hollingshead, S., Lea, S.M., McVicker, G., Tang, C.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Antitoxin | 75 | Shigella sonnei | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
tRNA(fMet)-specific endonuclease VapC | 152 | Shigella sonnei | Mutation(s): 0  Gene Names: vapC, BZ172_30265 EC: 3.1 | ||
UniProt | |||||
Find proteins for A0A0H9P9N5 (Shigella sonnei) Explore A0A0H9P9N5  Go to UniProtKB:  A0A0H9P9N5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H9P9N5 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 95.873 | α = 90 |
b = 95.873 | β = 90 |
c = 116.389 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
DIALS | data reduction |
DIALS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Wellcome Trust | United Kingdom | 102908/Z/13/Z |