Download MendeleyLabelling protein crystals by argon at 2 kbar
Prange, T., Carpentier, P.To be published.
6RA8
Horse spleen apoferritin under 2 kBar of argon
- PDB DOI: https://doi.org/10.2210/pdb6RA8/pdb
- Classification: METAL TRANSPORT
- Organism(s): Equus caballus
- Mutation(s): No
- Deposited: 2019-04-05 Released: 2020-05-06
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.221
- R-Value Work: 0.171
- R-Value Observed: 0.174
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ferritin light chain | 173 | Equus caballus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P02791 (Equus caballus) Explore P02791 Go to UniProtKB: P02791 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02791 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CD Query on CD | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | J [auth A], K [auth A], L [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| AR Query on AR | I [auth A] | ARGON Ar XKRFYHLGVUSROY-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| CSO Query on CSO | A | L-PEPTIDE LINKING | C3 H7 N O3 S |  | CYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.221
- R-Value Work: 0.171
- R-Value Observed: 0.174
- Space Group: F 4 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 180.873 | α = 90 |
| b = 180.873 | β = 90 |
| c = 180.873 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| SCALA | data scaling |
| FFT | phasing |
Entry History
Deposition Data
- Released Date: 2020-05-06 Deposition Author(s): Prange, T., Carpentier, P., Colloc'h, N.
Revision History (Full details and data files)
- Version 1.0: 2020-05-06
Type: Initial release - Version 1.1: 2024-01-24
Changes: Data collection, Database references, Derived calculations, Refinement description
