6NWV

Insulin Lispro Analog

• PDB DOI: https://doi.org/10.2210/pdb6NWV/pdb

• Classification: HORMONE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2019-02-07 Released: 2020-02-12 
• Deposition Author(s): Cruz-Rangel, A., Romero, A., Reyes-Grajeda, J.P.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free: 0.257 
• R-Value Work: 0.208 
• R-Value Observed: 0.213 

Literature

Crystal structure of Lispro hexameric insulin analog

Cruz-Rangel, A., Romero, A., Reyes-Grajeda, J.P.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D3  (Explore in 3D)
Global Stoichiometry: Hetero 12-mer - A6B6 Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 12-mer - A6B5C1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: light scattering

Macromolecule Content

• Total Structure Weight: 36.05 kDa 
• Atom Count: 2,542 
• Modelled Residue Count: 300 
• Deposited Residue Count: 306 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Insulin A chain	A, C, E, G, I, K	21	Homo sapiens	Mutation(s): 0  Gene Names: INS
UniProt & NIH Common Fund Data Resources
Find proteins for P01308 (Homo sapiens) Explore P01308  Go to UniProtKB:  P01308
PHAROS:  P01308 GTEx:  ENSG00000254647

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Insulin Lispro B chain	B, D, F, H, J, L	30	Homo sapiens	Mutation(s): 2  Gene Names: INS
UniProt & NIH Common Fund Data Resources
Find proteins for P01308 (Homo sapiens) Explore P01308  Go to UniProtKB:  P01308
PHAROS:  P01308 GTEx:  ENSG00000254647

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CRS	M [auth A], O [auth C], Q [auth E], T [auth G], U [auth G], V [auth I], X [auth K]	M-CRESOL C7 H8 O RLSSMJSEOOYNOY-UHFFFAOYSA-N
GOL	P [auth D], S [auth F]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
ZN	N [auth B], R [auth F]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
CL	W [auth J], Y [auth L]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free: 0.257 
• R-Value Work: 0.208 
• R-Value Observed: 0.213 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 46.161	α = 90
b = 61.789	β = 111.46
c = 58.618	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
MOLREP	phasing

Structure Validation

Currently 6NWV does not have a validation slider image.

Entry History 

Deposition Data

• Released Date: 2020-02-12 
Deposition Author(s): Cruz-Rangel, A., Romero, A., Reyes-Grajeda, J.P.

Revision History  

• Version 1.0: 2020-02-12
  Type: Initial release
  
• Version 1.1: 2023-10-11
  Changes: Data collection, Database references, Derived calculations, Refinement description