Crystal Structure of an Arabidopsis Copine providing insights into this protein family
Wang, Q.C., Jiang, M.Q., Isupov, M.N., Sun, L.F., Wu, Y.K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein BONZAI 1 | 553 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: BON1, CPN1, At5g61900, K22G18.2 | ||
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3  Go to UniProtKB:  Q941L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein BONZAI 1 | 528 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: BON1, CPN1, At5g61900, K22G18.2 | ||
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3  Go to UniProtKB:  Q941L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein BONZAI 1 | 550 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: BON1, CPN1, At5g61900, K22G18.2 | ||
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3  Go to UniProtKB:  Q941L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein BONZAI 1 | 527 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: BON1, CPN1, At5g61900, K22G18.2 | ||
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3  Go to UniProtKB:  Q941L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein BONZAI 1 | 553 | Arabidopsis thaliana | Mutation(s): 0  Gene Names: BON1, CPN1, At5g61900, K22G18.2 | ||
UniProt | |||||
Find proteins for Q941L3 (Arabidopsis thaliana) Explore Q941L3  Go to UniProtKB:  Q941L3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q941L3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 7 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PG4 Query on PG4 | DC [auth D], QA [auth B] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
PGE Query on PGE | FA [auth A], OB [auth C], SA [auth B], UD [auth F], V [auth A] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
PEG Query on PEG | AB [auth C] BC [auth D] CB [auth C] DB [auth C] EC [auth D] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | AC [auth D] BA [auth A] CA [auth A] CD [auth E] DA [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | AA [auth A] AD [auth E] BB [auth C] BD [auth E] BE [auth G] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA (Subject of Investigation/LOI) Query on CA | AE [auth F], QC [auth D] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | PC [auth D], QB [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 122.284 | α = 90 |
b = 118.716 | β = 90.2 |
c = 222.253 | γ = 90 |
Software Name | Purpose |
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Aimless | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHENIX | phasing |