6GP9

Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a

• PDB DOI: https://doi.org/10.2210/pdb6GP9/pdb

• Classification: TRANSFERASE
• Organism(s): Hepacivirus hominis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2018-06-05 Released: 2020-09-30 
• Deposition Author(s): Janowski, R., Geber, H., Protzer, U., Niessing, D.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free: 0.257 
• R-Value Work: 0.202 
• R-Value Observed: 0.205 

Literature

Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a

Gaber, H., Niessing, D., Protzer, U., Janowski, R.

(2022) Biorxiv 

• DOI: https://doi.org/10.1101/2022.04.06.486972

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 64.05 kDa 
• Atom Count: 4,340 
• Modelled Residue Count: 553 
• Deposited Residue Count: 575 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RNA-directed RNA polymerase	A	575	Hepacivirus hominis	Mutation(s): 0  EC: 2.7.7.48
UniProt
Find proteins for Q506M7 (Hepacivirus hominis) Explore Q506M7  Go to UniProtKB:  Q506M7

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free: 0.257 
• R-Value Work: 0.202 
• R-Value Observed: 0.205 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.29	α = 90
b = 87.05	β = 90
c = 96.72	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
MOLREP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-09-30 
Deposition Author(s): Janowski, R., Geber, H., Protzer, U., Niessing, D.

Revision History  

• Version 1.0: 2020-09-30
  Type: Initial release
  
• Version 1.1: 2022-04-13
  Changes: Database references
• Version 1.2: 2024-01-17
  Changes: Data collection, Database references, Refinement description