Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
Hira, D., Matsumura, M., Kitamura, R., Fujii, T.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative copper-type nitrite reductase | 326 | Candidatus Jettenia caeni | Mutation(s): 0  Gene Names: KSU1_D0929 | ||
UniProt | |||||
Find proteins for I3IR93 (Candidatus Jettenia caeni) Explore I3IR93  Go to UniProtKB:  I3IR93 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | I3IR93 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | H [auth A], M [auth B], Q [auth C], U [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CU (Subject of Investigation/LOI) Query on CU | E [auth A] F [auth A] I [auth B] J [auth B] K [auth B] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N | |||
CA Query on CA | G [auth A], L [auth B], P [auth C], T [auth D] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 270.217 | α = 90 |
b = 270.217 | β = 90 |
c = 128.909 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PDB_EXTRACT | data extraction |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science | Japan | JSPS KAKENHI 16K07703 |