Crystal structure of a MARTX toxin effector domain
Yin, L., Zhu, Y.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative RTX-toxin | 616 | Vibrio vulnificus | Mutation(s): 1  Gene Names: rtxA1 | ||
UniProt | |||||
Find proteins for F1CLG1 (Vibrio vulnificus) Explore F1CLG1  Go to UniProtKB:  F1CLG1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | F1CLG1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MES Query on MES | F [auth A], J [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N | |||
SO4 Query on SO4 | E [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
DIO Query on DIO | C [auth A], D [auth A] | 1,4-DIETHYLENE DIOXIDE C4 H8 O2 RYHBNJHYFVUHQT-UHFFFAOYSA-N | |||
FMT Query on FMT | G [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
CL Query on CL | H [auth A], I [auth A], K [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 124.743 | α = 90 |
b = 185.185 | β = 95.6 |
c = 81.365 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
DENZO | data collection |
SCALEPACK | data scaling |
PDB_EXTRACT | data extraction |
DENZO | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China | China | 81530068 |