5TOF

Room temperature structure of ubiquitin variant u7ub25


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.12 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.154

Literature

Macromolecules
Sequence Display for 5TOF

Classification: SIGNALING PROTEIN

Total Structure Weight: 8929.12

Macromolecule Entities
Molecule Chains Length Organism Details
Polyubiquitin-B A 78 Homo sapiens Mutation: G0S, T7F, L8R, I13Y, E34L, L69G, L71R
Gene Name(s): UBB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.12 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.154
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 42.72 α = 90.00
b = 42.72 β = 90.00
c = 54.88 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-10-17
  • Released Date: 2017-05-24
  • Deposition author(s): Biel, J.T., Thompson, M.C., Cunningham, C.N., Corn, J.E., Fraser, J.S.

Revision History

  • Version 1_0: 2017-05-24

    Type: Initial release

  • Version 1_1: 2017-09-27

    Type: Author supporting evidence