5JLF

Structure of the F-actin-tropomyosin complex (reprocessed)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Aggregation State: Filament
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 5JLF

Classification: CONTRACTILE PROTEIN

Total Structure Weight: 234650.05

Macromolecule Entities
Molecule Chains Length Organism Details
Actin, alpha skeletal muscle A, B, C, D, E 375 Oryctolagus cuniculus Gene Name(s): ACTA1 Gene View ACTA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Tropomyosin Alpha-1 F, G 135 Mus musculus Details: MOUSE TROPOMYSIN WAS USED (UNP P58771, RESIDUES 97-231). DUE TO THE LIMITED RESOLUTION OF THE CRYO-EM DENSITY IN THE REGION OF TROPOMYOSIN, TROPOMYOSIN HAS BEEN REPRESENTED AS POLY(UNK).

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A, B, C, D, E ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D, E MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
HIC
Query on HIC
A, B, C, D, E L-PEPTIDE LINKING C7 H11 N3 O2 HIS
UNK
Query on UNK
F, G L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-04-27
  • Released Date: 2016-06-15
  • Deposition author(s): von der Ecken, J., Raunser, S.

Revision History

  • Version 1_0: 2016-06-15

    Type: Initial release

  • Version 1_1: 2016-06-29

    Type: Database references

  • Version 1_2: 2016-07-13

    Type: Database references

  • Version 1_3: 2017-08-02

    Type: Data collection, Database references, Derived calculations, Experimental preparation