Crystal structure of Cupin 2 conserved barrel domain protein from Kribbella flavida DSM 17836
Chang, C., Cuff, M., Chhor, G., Endres, M., Joachimiak, A.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cupin 2 conserved barrel domain protein | 123 | Kribbella flavida DSM 17836 | Mutation(s): 0  Gene Names: Kfla_2934 | ||
UniProt | |||||
Find proteins for D2Q1L0 (Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)) Explore D2Q1L0  Go to UniProtKB:  D2Q1L0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D2Q1L0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | E [auth A], F [auth A], J [auth B], K [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
ACT Query on ACT | G [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
NI Query on NI | D [auth A], I [auth B] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N | |||
EOH Query on EOH | C [auth A], H [auth B] | ETHANOL C2 H6 O LFQSCWFLJHTTHZ-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 61.162 | α = 90 |
b = 61.162 | β = 90 |
c = 120.973 | γ = 120 |
Software Name | Purpose |
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SCALEPACK | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-3000 | data reduction |
HKL-3000 | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM115586 |