Download MendeleyStructure of E.Coli fructose 1,6-bisphosphate aldolase, Acetate bound form
Tran, T.H., Huynh, K.H., Ho, T.H., Kang, L.W.To be published.
5GK8
Structure of E.Coli fructose 1,6-bisphosphate aldolase, Acetate bound form
- PDB DOI: https://doi.org/10.2210/pdb5GK8/pdb
- Classification: LYASE
- Organism(s): Escherichia coli K-12
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2016-07-03 Released: 2017-07-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.200
- R-Value Work: 0.161
- R-Value Observed: 0.162
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Fructose-bisphosphate aldolase class 2 | 359 | Escherichia coli K-12 | Mutation(s): 0 Gene Names: fbaA, fba, fda, b2925, JW2892 EC: 4.1.2.13 |  | |
UniProt | |||||
Find proteins for P0AB71 (Escherichia coli (strain K12)) Explore P0AB71 Go to UniProtKB: P0AB71 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0AB71 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | J [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A], D [auth A], E [auth A], I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| ZN Query on ZN | G [auth A], H [auth A], L [auth B], M [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| ACT Query on ACT | F [auth A], K [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.200
- R-Value Work: 0.161
- R-Value Observed: 0.162
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.598 | α = 90 |
| b = 73.351 | β = 102.63 |
| c = 78.269 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| HKL-2000 | data reduction |
| HKL-3000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2017-07-05 Deposition Author(s): Tran, T.H., Huynh, K.H., Ho, T.H., Kang, L.W.
Revision History (Full details and data files)
- Version 1.0: 2017-07-05
Type: Initial release - Version 1.1: 2023-11-08
Changes: Data collection, Database references, Derived calculations, Refinement description
