5YJ3

Crystal structure of TZAP and telomeric DNA complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 5YJ3

Classification: DNA BINDING PROTEIN / DNA

Total Structure Weight: 37353.93


Macromolecule Entities
Molecule Chains Length Organism Details
Telomere zinc finger-associated protein C, D 107 Homo sapiens Fragment: UNP RESIDUES 516-620
Gene Name(s): ZBTB48 Gene View HKR3 ZNF855
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3') A 18 Synthetic construct
DNA (5'-D(*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3') B 18 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.226
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 56.71 α = 90.00
b = 56.71 β = 90.00
c = 226.23 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-10-07
  • Released Date: 2017-12-06
  • Deposition author(s): Li, F., Zhao, Y.

Revision History

  • Version 1_0: 2017-12-06

    Type: Initial release