5XFR

Ternary complex of MTF2, DNA and histone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 5XFR

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 83201.01


Macromolecule Entities
Molecule Chains Length Organism Details
Metal-response element-binding transcription factor 2 A, B 317 Homo sapiens Fragment: UNP residues 43-358
Gene Name(s): MTF2 Gene View PCL2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Peptide from Histone H3.1 C, D 8 Homo sapiens Gene Name(s): HIST1H3A Gene View H3FA HIST1H3B Gene View H3FL HIST1H3C Gene View H3FC HIST1H3D Gene View H3FB HIST1H3E Gene View H3FD HIST1H3F Gene View H3FI HIST1H3G Gene View H3FH HIST1H3H Gene View H3FK HIST1H3I Gene View H3FF HIST1H3J Gene View H3FJ
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3') E, F 13 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
M3L
Query on M3L
C, D L-PEPTIDE LINKING C9 H21 N2 O2 LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.203
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 137.74 α = 90.00
b = 137.74 β = 90.00
c = 101.23 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-04-11
  • Released Date: 2017-09-13
  • Deposition author(s): Wang, Z., Li, H.

Revision History

No revisions since initial release