5WSS

Crystal structure of T-Hg-T pair containing DNA duplex in the presence Ba2+

Structural Biology Knowledgebase: 5WSS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.148

Literature

Macromolecules
Sequence Display for 5WSS

Classification: DNA

Total Structure Weight: 2756.51

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*GP*TP*CP*GP*TP*CP*C)-3') A 8 Unidentified

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BA
Query on BA

A BARIUM ION
Ba
XDFCIPNJCBUZJN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.193
  • R-Value Work: 0.148
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 41.00 α = 90.00
b = 41.00 β = 90.00
c = 24.93 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2016-12-08
  • Released Date: 2017-02-08
  • Deposition author(s): Gan, J.H., Liu, H.H.

Revision History

No revisions since initial release