5W0O

Structure of human TUT7 catalytic module (CM) in complex with dsRNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.49 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 5W0O

Classification: TRANSFERASE / RNA

Total Structure Weight: 100067.71


Macromolecule Entities
Molecule Chains Length Organism Details
Terminal uridylyltransferase 7 A, B 389 Homo sapiens EC#: 2.7.7.52 IUBMB
Fragment: nucleotidyltransferase domain (UNP residues 983-1365)
Gene Name(s): ZCCHC6 Gene View HS2 KIAA1711 TUT7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
double-stranded RNA C, D 15 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UTP
Query on UTP

A, B URIDINE 5'-TRIPHOSPHATE
C9 H15 N2 O15 P3
PGAVKCOVUIYSFO-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.49 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.205
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 66.82 α = 90.00
b = 80.85 β = 90.00
c = 181.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-05-31
  • Released Date: 2017-06-28
  • Deposition author(s): Faehnle, C.R., Walleshauser, J., Joshua-Tor, L.

Revision History

  • Version 1_0: 2017-06-28

    Type: Initial release

  • Version 1_1: 2017-07-19

    Type: Database references

  • Version 1_2: 2017-08-16

    Type: Database references