5VR4

RNA octamer containing 2'-F-4'-OMe U.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 5VR4

Classification: RNA

Total Structure Weight: 10361.37

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*CP*GP*AP*AP*(UMO)P*UP*CP*G)-3') A, B, C, D 8 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CON
Query on CON

C COBALT TETRAAMMINE ION
Co H12 N4
AWWXFUYNCLHXPM-XXVUYYQGAB
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UMO
Query on UMO
A, B, C, D NON-POLYMER C10 H14 F N2 O9 P U

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.186
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 44.39 α = 90.00
b = 44.39 β = 90.00
c = 85.92 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-05-10
  • Released Date: 2017-10-04
  • Deposition author(s): Harp, J.M., Egli, M.

Revision History

  • Version 1_0: 2017-10-04

    Type: Initial release

  • Version 1_1: 2017-10-25

    Type: Database references