5VQB

Crystal structure of rifampin monooxygenase from Streptomyces venezuelae, complex with FAD


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.39 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 5VQB

Classification: OXIDOREDUCTASE

Total Structure Weight: 160143.30

Macromolecule Entities
Molecule Chains Length Organism Details
Rifampin monooxygenase A, B, C 476 Streptomyces venezuelae Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B, C FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.39 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.226
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 203.09 α = 90.00
b = 129.29 β = 105.52
c = 75.31 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-05-08
  • Released Date: 2017-08-16
  • Deposition author(s): Cox, G., Kelso, J., Stogios, P.J., Savchenko, A., Anderson, W.F., Wright, G.D., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2017-09-13
    Type: Author supporting evidence