5URQ

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor p176


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 5URQ

Classification: OXIDOREDUCTASE / OXIDOREDUCTASE INHIBITOR

Total Structure Weight: 355104.72

Macromolecule Entities
Molecule Chains Length Organism Details
Inosine-5'-monophosphate dehydrogenase A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 406 Campylobacter jejuni EC#: 1.1.1.205 IUBMB
Gene Name(s): guaB Cj8486_1016
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
8L7
Query on 8L7

A, B, C, D, E, F, G, H N-{2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan- 2-yl}carbamoyl)amino]phenyl}-alpha-D-ribofuranosylamine
C24 H30 Cl N3 O5
RGENKIJBZZZCQP-YSFYHYPLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IMP
Query on IMP

A, B, C, D, E, F, G, H INOSINIC ACID
C10 H13 N4 O8 P
GRSZFWQUAKGDAV-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A, B, D, E, F, G POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.180
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 98.49 α = 90.00
b = 141.79 β = 94.47
c = 121.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-02-12
  • Released Date: 2017-03-01
  • Deposition author(s): Kim, Y., Maltseva, N., Makowska-Grzyska, M., Gu, M., Gollapalli, D., Hedstrom, L., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

No revisions since initial release