5UQP

The crystal structure of cupin protein from Rhodococcus jostii RHA1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 5UQP

Classification: UNKNOWN FUNCTION

Total Structure Weight: 28086.15

Macromolecule Entities
Molecule Chains Length Organism Details
Cupin A, B 125 Rhodococcus jostii Gene Name(s): RHA1_ro08652
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.166
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 139.45 α = 90.00
b = 139.45 β = 90.00
c = 80.07 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-02-08
  • Released Date: 2017-02-22
  • Deposition author(s): Tan, K., Li, H., Clancy, S., Phillips Jr., G.N., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)

Revision History

No revisions since initial release