5UNC

The crystal structure of PHOSPHOENOLPYRUVATE PHOSPHOMUTASE from Streptomyces platensis subsp. rosaceus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 5UNC

Classification: ISOMERASE

Total Structure Weight: 145961.20

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOENOLPYRUVATE PHOSPHOMUTASE A, B, C, D 337 Streptomyces platensis Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
XYS
Query on XYS

A, C, D XYLOPYRANOSE
C5 H10 O5
SRBFZHDQGSBBOR-LECHCGJUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TLA
Query on TLA

A, B, C, D L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

B, C FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.155
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 89.33 α = 90.00
b = 122.04 β = 90.00
c = 136.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-01-30
  • Released Date: 2017-02-22
  • Deposition author(s): Tan, K., Hatzos-Skintges, C., Endres, M., Phillips Jr., G.N., Joachimiak, A., Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)

Revision History

  • Version 1_0: 2017-02-22

    Type: Initial release

  • Version 1_1: 2017-09-20

    Type: Author supporting evidence