5TSN

Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.174

Literature

Macromolecules
Sequence Display for 5TSN

Classification: TRANSFERASE / RNA

Total Structure Weight: 62036.61


Macromolecule Entities
Molecule Chains Length Organism Details
Norwalk virus polymerase A 510 Norwalk virus Fragment: UNP residues 331-838
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3') P, T 8 Norwalk virus Primer RNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.174
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 81.76 α = 90.00
b = 81.76 β = 90.00
c = 189.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-10-30
  • Released Date: 2017-04-12
  • Deposition author(s): Shaik, M.M., Ng, K.K.

Revision History

  • 2017-04-19
    Type: Database references
  • 2017-08-02
    Type: Database references