5TGN

Crystal structure of protein Sthe_2403 from Sphaerobacter thermophilus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.161

Literature

Macromolecules
Sequence Display for 5TGN

Classification: UNKNOWN FUNCTION

Total Structure Weight: 49420.14

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein A, B, C, D 111 Sphaerobacter thermophilus Gene Name(s): Sthe_2403
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, C, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.161
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 90.18 α = 90.00
b = 66.91 β = 101.41
c = 90.64 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-09-28
  • Released Date: 2016-10-26
  • Deposition author(s): Michalska, K., Li, H., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release