5TEU

Brucella periplasmic binding protein YehZ

Structural Biology Knowledgebase: 5TEU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.62 Å
  • R-Value Free: 0.185
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 5TEU

Classification: TRANSPORT PROTEIN

Total Structure Weight: 65038.12

Macromolecule Entities
Molecule Chains Length Organism Details
Substrate-binding region of ABC-type glycine betaine transport system A, B 301 Brucella abortus Fragment: UNP residues 25-304
Gene Name(s): BAB1_0226
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TLA
Query on TLA

A, B L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 111.37 α = 90.00
b = 111.37 β = 90.00
c = 122.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-09-22
  • Released Date: 2017-01-11
  • Deposition author(s): Herrou, J., Crosson, S.

Revision History

  • 2017-03-01
    Type: Citation | Details: Citation