Macromolecules
Sequence Display for 5T87

Classification: TOXIN

Total Structure Weight: 86349.34

Macromolecule Entities
Molecule Chains Length Organism Details
CdiI immunity protein A, B, C, D 116 Cupriavidus taiwanensis Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CdiA toxin E, F, G, H 76 Cupriavidus taiwanensis Fragment: catalytic domain
Details: The cloned fragment is longer and starts with T3228 of the original sequence, however purified complex was treated with trypsin prior to crystallization. The provided sequence corresponds to the most likely fragment obtained after cleavage.
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F, G, H L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.215
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 107.10 α = 90.00
b = 107.10 β = 90.00
c = 315.27 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2016-09-06
  • Released Date: 2017-09-13
  • Deposition author(s): Michalska, K., Joachimiak, G., Jedrzejczak, R., Hayes, C.S., Goulding, C.W., Joachimiak, A., Structure-Function Analysis of Polymorphic CDI Toxin-Immunity Protein Complexes , Midwest Center for Structural Genomics (MCSG)

Revision History

  • Version 1_0: 2017-09-13

    Type: Initial release

  • Version 1_1: 2017-09-27

    Type: Author supporting evidence