5T7X

Crystal structure of HHV-4 EBNA1 DNA binding domain (patient-derived, nasopharyngeal carcinoma) bound to DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 5T7X

Classification: DNA BINDING PROTEIN / DNA

Total Structure Weight: 43697.19


Macromolecule Entities
Molecule Chains Length Organism Details
Epstein-Barr nuclear antigen 1 A, B 149 Human gammaherpesvirus 4 Fragment: UNP residues 459-507
Mutation: T585I
Gene Name(s): EBNA1 BKRF1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*GP*AP*TP*AP*GP*CP*CP*TP*AP*TP*GP*CP*TP*AP*CP*CP*C)-3') C 18 Human gammaherpesvirus 4
DNA (5'-D(*GP*GP*GP*TP*AP*GP*CP*AP*TP*AP*GP*GP*CP*TP*AP*TP*CP*C)-3') D 18 Human gammaherpesvirus 4


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.185
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 60.03 α = 90.00
b = 64.90 β = 90.00
c = 111.78 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2016-09-06
  • Released Date: 2017-07-19
  • Deposition author(s): Malecka, K.A., Messick, T.E., Lieberman, P.M.

Revision History

No revisions since initial release