5O20

Stucture of Nrd1 RNA binding domain in complex with RNA (UUAGUAAUCC)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.53 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 5O20

Classification: TRANSCRIPTION

Total Structure Weight: 23353.62


Macromolecule Entities
Molecule Chains Length Organism Details
Protein NRD1 A 180 Saccharomyces cerevisiae Gene Name(s): NRD1 YNL251C N0868
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*UP*AP*GP*UP*AP*AP*UP*C)-3') B 10 Saccharomyces cerevisiae

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TRS
Query on TRS

A 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER (Synonym)
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.53 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.225
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 66.16 α = 90.00
b = 66.16 β = 90.00
c = 156.91 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-05-19
  • Released Date: 2017-08-02
  • Deposition author(s): Franco-Echevarria, E., Perez-Canadillas, J.M., Gonzalez, B.

Revision History

No revisions since initial release