5NG6

Crystal structure of FnCas12a bound to a crRNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.34 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.239

Literature

Macromolecules
Sequence Display for 5NG6

Classification: HYDROLASE

Total Structure Weight: 664171.50


Macromolecule Entities
Molecule Chains Length Organism Details
CRISPR-associated endonuclease Cpf1 A, C, E, G 1302 Francisella tularensis EC#: 3.1 IUBMB
Details: SNA sequence at the N-terminus is derived from expression vector.
Gene Name(s): cpf1 FTN_1397
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
crRNA B, D, F, H 43 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A, B, C, D, E, F, G, H MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.34 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.239
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 214.68 α = 90.00
b = 277.06 β = 90.00
c = 135.64 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-03-16
  • Released Date: 2017-06-14
  • Deposition author(s): Swarts, D.C., van der Oost, J., Jinek, M.

Revision History

No revisions since initial release