5MVB

Solution structure of a human G-Quadruplex hybrid-2 form in complex with a Gold-ligand


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 5MVB

Classification: DNA

Total Structure Weight: 9072.87

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (26-MER) A 26 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AUZ
Query on AUZ

A bis(m2-Oxo)-bis(2-methyl-2,2'-bipyridine)- di-gold(iii)
C24 H24 Au2 N4 O2
GICNHPJNXLRXOX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200
  • Conformers Submitted: 10
  • Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-01-16
  • Released Date: 2017-05-31
  • Deposition author(s): Wirmer-Bartoschek, J., Jonker, H.R.A., Bendel, L.E., Gruen, T., Bazzicalupi, C., Messori, L., Gratteri, P., Schwalbe, H.

Revision History

  • Version 1_0: 2017-05-31

    Type: Initial release

  • Version 1_1: 2017-06-14

    Type: Database references