How Bacterial Chemoreceptors Evolve Novel Ligand Specificities
Gavira, J.A., Jimenez-Rico, M., Pineda-Molina, E., Krell, T.(2020) mBio 
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
(2020) mBio 
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Chemotaxis protein | 270 | Pseudomonas aeruginosa | Mutation(s): 0  Gene Names: pctA_1, mcpB_2, AO946_32780, AOY09_01348, PAERUG_P32_London_17_VIM_2_10_11_00198 | ||
UniProt | |||||
Find proteins for G3XD24 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore G3XD24  Go to UniProtKB:  G3XD24 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | G3XD24 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MET Query on MET | C [auth A], J [auth B] | METHIONINE C5 H11 N O2 S FFEARJCKVFRZRR-BYPYZUCNSA-N | |||
GOL Query on GOL | F [auth A], I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACT Query on ACT | D [auth A], E [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
FMT Query on FMT | G [auth A] H [auth A] K [auth B] L [auth B] M [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 71.68 | α = 90 |
b = 76.555 | β = 90 |
c = 116.504 | γ = 90 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
MICINN | Spain | BIO2013-4297-P |