5IYE

Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.69 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 5IYE

Classification: DNA

Total Structure Weight: 8696.35

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3') A, B 14 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.69 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.188
  • Space Group: P 41

Unit Cell:

Length (Å) Angle (°)
a = 29.28 α = 90.00
b = 29.28 β = 90.00
c = 88.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-24
  • Released Date: 2017-03-29
  • Deposition author(s): Karthik, S., Thirugnanasambandam, A., Mandal, P.K., Gautham, N.

Revision History

  • 2017-04-19
    Type: Database references