5IP8

Lambda-Ru(TAP)2dppz bound to d(CCGGCTCCGG)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 5IP8

Classification: DNA

Total Structure Weight: 7863.09

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*CP*GP*GP*AP*GP*CP*CP*GP*G)-3') B 10 Synthetic construct
DNA (5'-D(*CP*CP*GP*GP*CP*TP*CP*CP*GP*G)-3') A 10 Synthetic construct

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RKL
Query on RKL

B Ru(tap)2(dppz) complex
C38 H22 N12 Ru
PIKVAZQLFXBUSD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BA
Query on BA

A, B BARIUM ION
Ba
XDFCIPNJCBUZJN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.76 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.188
  • Space Group: P 43

Unit Cell:

Length (Å) Angle (°)
a = 47.45 α = 90.00
b = 47.45 β = 90.00
c = 35.13 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-09
  • Released Date: 2017-03-29
  • Deposition author(s): Souter, J.E., Hall, J.P., Cardin, C.J.

Revision History

No revisions since initial release