5IP2

Tomato spotted wilt tospovirus nucleocapsid protein-ssRNA complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.282

Literature

Macromolecules
Sequence Display for 5IP2

Classification: VIRAL PROTEIN / RNA

Total Structure Weight: 102026.81


Macromolecule Entities
Molecule Chains Length Organism Details
Nucleoprotein A, B, C 279 Tomato spotted wilt orthotospovirus Gene Name(s): N
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') E 19 Synthetic construct
RNA (5'-D(P*UP*UP*U)-3') D, F 3 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.282
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 68.21 α = 90.00
b = 94.73 β = 112.60
c = 70.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-09
  • Released Date: 2017-03-22
  • Deposition author(s): Komoda, K., Narita, M., Yamashita, K., Tanaka, I., Yao, M.

Revision History

  • Version 1_0: 2017-03-22

    Type: Initial release

  • Version 2_0: 2017-06-14

    Type: Advisory, Atomic model, Data collection, Database references, Derived calculations, Polymer sequence

  • Version 2_1: 2017-10-11

    Type: Data collection