5HSW

KSHV SOX RNA complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 5HSW

Classification: HYDROLASE

Total Structure Weight: 65235.86


Macromolecule Entities
Molecule Chains Length Organism Details
ORF 37 A 488 Human gammaherpesvirus 8 Mutation: E244S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(P*UP*CP*UP*UP*GP*AP*AP*GP*CP*AP*GP*CP*UP*UP*CP*CP*AP*G)-3') B 31 Human gammaherpesvirus 8

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.208
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 198.20 α = 90.00
b = 45.90 β = 90.10
c = 67.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-01-26
  • Released Date: 2017-02-01
  • Deposition author(s): Barrett, T.E.

Revision History

  • Version 1_0: 2017-02-01

    Type: Initial release

  • Version 1_1: 2017-02-08

    Type: Database references

  • Version 1_2: 2017-02-15

    Type: Database references

  • Version 1_3: 2017-05-17

    Type: Database references