5HOD

Structure of LHX4 transcription factor complexed with DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.68 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.233

Literature

Macromolecules
Sequence Display for 5HOD

Classification: TRANSCRIPTION

Total Structure Weight: 26593.65


Macromolecule Entities
Molecule Chains Length Organism Details
LIM/homeobox protein Lhx4 A, D 61 Homo sapiens Fragment: UNP residues 156-216
Gene Name(s): LHX4 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(P*AP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*GP*TP*AP*AP*TP*TP*AP*G)-3') B 20 Homo sapiens
DNA (5'-D(P*CP*TP*AP*AP*TP*TP*AP*CP*GP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*T)-3') C 20 Homo sapiens


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.68 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.233
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 40.77 α = 90.00
b = 68.44 β = 90.00
c = 200.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-01-19
  • Released Date: 2017-02-01
  • Deposition author(s): Morgunova, E., Yin, Y., Popov, A., Taipale, J.

Revision History

  • 2017-05-17
    Type: Database references